PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS57409.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 286aa    MW: 29865.8 Da    PI: 7.0884
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS57409.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.6e-10132176554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  EPS57409.1 132 HSIAERLRRERIAEKIRALQELVPTvN------KTDRAAMLDEIVDYVKFL 176
                 99***********************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.27E-11125181No hitNo description
SuperFamilySSF474592.88E-15125186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.152127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-15129186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-7132176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-11133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0031347Biological Processregulation of defense response
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
SASDEFLDQI LGFPGYGPGG DPDSETGAMM LQLGSGDASS PHLGVISAGV GVGMGAAYGG  60
GGFPLGLSLD PRKSAGGGYG DASGSGKRFG QGFHAPSMAA NPVVVPPPPP APHPPQMRPR  120
VRARRGQATD PHSIAERLRR ERIAEKIRAL QELVPTVNKT DRAAMLDEIV DYVKFLRLQV  180
KVLSMSRLGG AGAVAPLVTD IPISSSSSSI EGGAWEKWSS DGTERQVAKL MEENVGAAMQ  240
LLQSKALCIM PVSLASAIYH HHHHAHPPPP PESSSSITNP EFNPPP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831677.11e-116PREDICTED: transcription factor UNE12
SwissprotO227688e-94UNE12_ARATH; Transcription factor UNE12
SwissprotQ93Y006e-94BH007_ARATH; Transcription factor bHLH7
TrEMBLS8BSR00.0S8BSR0_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_07s0141g00220.t014e-98(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57992434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03040.22e-71bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]